PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN16571.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 252aa    MW: 28246.1 Da    PI: 5.4458
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN16571.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH231.5e-07143190455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR +iN+++  L+ ++P +     k +  a +L + ++Y++sLq
  KHN16571.1 143 SHSLAERVRRGKINEKLRCLQNIVPGC----YKTMGMAIMLDEIINYVQSLQ 190
                 8*************************8....355888999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.21E-9137194No hitNo description
SuperFamilySSF474596.94E-16137206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.589139189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-15139201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.0E-5143190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.5E-7145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MAEFTADLQS LRFPFLDIDN MEIQNFMMPF SCESFLGSPE AEFPGNLLEE NFPALVQCVD  60
HNEVPVLVPI GSVKNEIHEG QKRKATDICE PSSANSTPAV SESGSKTKNS SGRGKRVKRN  120
SIEDKKPNEV VHVRAKRGQA TDSHSLAERV RRGKINEKLR CLQNIVPGCY KTMGMAIMLD  180
EIINYVQSLQ HQVEFLSMKL TAASTYYDLN SESDALETMQ RARASEVKEL GKCVREGSEE  240
VSCFEPTWPW PL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1360591e-134BT136059.1 Lotus japonicus clone JCVI-FLLj-3K3 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003532505.10.0PREDICTED: transcription factor BEE 3-like
SwissprotQ8GWK71e-62BEE3_ARATH; Transcription factor BEE 3
TrEMBLA0A0B2Q4S60.0A0A0B2Q4S6_GLYSO; Transcription factor BEE 3
TrEMBLK7L4X50.0K7L4X5_SOYBN; Uncharacterized protein
STRINGGLYMA08G04661.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33603467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.17e-64BR enhanced expression 3
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]